Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015933114.1_cds_XP_016479506.1_71039
CDS Infomation

[gene=LOC107800786] [db_xref=GeneID:107800786] [protein=flowering locus K homology domain-like] [protein_id=XP_016479506.1] [location=complement(join(25233..25338,25831..25893,25993..26168,26460..26522,26656..26768,26959..27050,27161..27219,28016..28237,28910..29011,29901..30284))] [gbkey=CDS]
Sequence

ATGTCCTATTATCCCCCAAATTCAATGGCTCATTCTCACCAAATCGAACCCTCCCTAAAC
CCTAACCTAAGCTCTAACCCTCCTCCTCCGGGAGCTCCACCTCCTGCTGCCGCCGTCCTT
TCTCAACCGTCCAATGAAGATCCCAATAGGTCTGCCACCGCTAAACGTCCGCGGGATGAA
TACACCACCGCGACGGACGAGGCAGGGTCGTCGGCTGACGCTGACCCGCCGCTGAAGAAG
CGGGTTAAGGTTGCCCAAGATGTAGTGTACCGTATAGTTGTACCGTCAAGACAGATCGGA
AAAGTTATCGGTAAAGTAGGGCATCGTATACAGAAGATTCGTGAAGAAACTAAAGCTACT
GTTAAAATTGCTGATGCCATCGCTCGCCATGAAGAGCGAGTAATCATCATTAGCTCGAAA
GACAATGACGATATGTTTAGTGACGCGGAGAATGCCCTTCATCAAATTGTGTCACTTATT
TTAAAGGATGATGATGGCAACATTGATGCACAGAAAGTTGGTGCTGGCCATGTGGCAGCA
AACACAATAAGGTTCTTGATTGCTGGTTCTCAGGCAGGTGGTTTGATAGGAGTGTCTGGT
CAAAATATTGAAACTTTGAGGAATTCTTCTGGAGCTGCTATCACAGTTCTTGCTCAACAT
CAGTTGCCATTGTGTGCATCTGCTCATGAGTCTGATCGTGTAGTACAGGTATCAGGAGAC
ATTCCTGCGGTCTTGAGAGCTGTGGTAGAAATCGGCTGTCAATTGAGGGATAATCCCCCT
AAACAAGTAATTTCAATCAGCCCAACATACAATCATGGCTATTCTCGCCCATCTCAACCA
TATGTGGATCCATCTTCAGCTGATTATGTAAATCTGACGATGTTAATTCCCGAATCATTA
GCTGGTGGGTTGATTGGAAGGTGTGGCTCCAATATTTCAAGGATCCGAGCAGAGTCTGGA
GCATCAATTAAGGTACATGGTGGGAAAGGCGAACAGAAACAAAGACAAGTCCATCTAGGT
GGTAATGCACAACAGGTCACCCTTGCCAAGCAACGAGTTGATGAATATGTCTATTCCCAG
TTGATGTTACAAGCTGGTGGTGAGCAGCTGCAGGAGACAATGCAGCTACAGCAGACAATG
CAGCTGCAGCAGTCAGTGCACCTGCAACAGTCAATGCAACTGCAGCAGTCAGTGCAGTTG
CAACAACAAATACCAGACCCATCTGCTACTCTGATGCAAGGATATAGTCACGGTCATGGA
CTTTATATGAGCAGTAACCAAGAAGCTCAAATGATGTCATCATACCCACAAGTATACACA
TCGAGCACCCCTCAAGCTCCTGCTTACTATGGTCAGTCTTATCCAGCTCCACAAATGTAG

Peptide Sequence

PEP ID

XP_016479506.1
PEP Infomation

PREDICTED: flowering locus K homology domain-like [Nicotiana tabacum]
Sequence

MSYYPPNSMAHSHQIEPSLNPNLSSNPPPPGAPPPAAAVLSQPSNEDPNRSATAKRPRDE
YTTATDEAGSSADADPPLKKRVKVAQDVVYRIVVPSRQIGKVIGKVGHRIQKIREETKAT
VKIADAIARHEERVIIISSKDNDDMFSDAENALHQIVSLILKDDDGNIDAQKVGAGHVAA
NTIRFLIAGSQAGGLIGVSGQNIETLRNSSGAAITVLAQHQLPLCASAHESDRVVQVSGD
IPAVLRAVVEIGCQLRDNPPKQVISISPTYNHGYSRPSQPYVDPSSADYVNLTMLIPESL
AGGLIGRCGSNISRIRAESGASIKVHGGKGEQKQRQVHLGGNAQQVTLAKQRVDEYVYSQ
LMLQAGGEQLQETMQLQQTMQLQQSVHLQQSMQLQQSVQLQQQIPDPSATLMQGYSHGHG
LYMSSNQEAQMMSSYPQVYTSSTPQAPAYYGQSYPAPQM

Transcript Sequence

Gene sequence data has not been registered.